Aredwood:
Get class D amplifiers instead of Class AB. As class D use less power for the same audio output.
Looks like the OP's sub amp is class D 600 w RMS in to 2 ohms at 14v supply, so probably pulling 45-50 amps continuous under a reasonably high load, excluding head unit of course. That's probably a sizeable increase on load on a standard alternator, especially with 13 year old wiring.
Getting an auto sparky to troubleshoot is the best solution, especially if you don't have access t the right tools etc.